Prediction of noncovalent interactions for PDB structure CZ_MDM2_PROTEIN
========================================================================
Created on 2023/03/01 using PLIP v2.2.2

If you are using PLIP in your work, please cite:
Adasme,M. et al. PLIP 2021: expanding the scope of the protein-ligand interaction profiler to DNA and RNA. Nucl. Acids Res. (05 May 2021), gkab294. doi: 10.1093/nar/gkab294
Analysis was done on model 1.

LIG:A:0 (LIG) - SMALLMOLECULE
-----------------------------
Interacting chain(s): A


**Hydrophobic Interactions**
+-------+---------+----------+-----------+-------------+--------------+------+--------------+---------------+-------------------------+------------------------+
| RESNR | RESTYPE | RESCHAIN | RESNR_LIG | RESTYPE_LIG | RESCHAIN_LIG | DIST | LIGCARBONIDX | PROTCARBONIDX | LIGCOO                  | PROTCOO                | 
+=======+=========+==========+===========+=============+==============+======+==============+===============+=========================+========================+
| 54    | LEU     | A        | 0         | LIG         | A            | 3.55 | 807          | 323           | -2.949, 0.374, -2.738   | -1.253, 2.969, -1.014  | 
+-------+---------+----------+-----------+-------------+--------------+------+--------------+---------------+-------------------------+------------------------+
| 57    | LEU     | A        | 0         | LIG         | A            | 3.35 | 806          | 352           | -2.307, -0.395, -1.769  | 0.794, -1.607, -2.113  | 
+-------+---------+----------+-----------+-------------+--------------+------+--------------+---------------+-------------------------+------------------------+
| 61    | ILE     | A        | 0         | LIG         | A            | 3.72 | 805          | 388           | -2.917, -0.614, -0.534  | -3.650, -3.955, -2.005 | 
+-------+---------+----------+-----------+-------------+--------------+------+--------------+---------------+-------------------------+------------------------+
| 91    | PHE     | A        | 0         | LIG         | A            | 3.54 | 804          | 623           | -4.170, -0.061, -0.268  | -5.696, -2.099, 2.191  | 
+-------+---------+----------+-----------+-------------+--------------+------+--------------+---------------+-------------------------+------------------------+
| 93    | VAL     | A        | 0         | LIG         | A            | 3.73 | 781          | 639           | -10.374, -0.340, -4.765 | -11.103, 0.603, -1.231 | 
+-------+---------+----------+-----------+-------------+--------------+------+--------------+---------------+-------------------------+------------------------+
| 93    | VAL     | A        | 0         | LIG         | A            | 3.70 | 787          | 638           | -8.802, 0.259, -4.405   | -9.163, -1.092, -0.978 | 
+-------+---------+----------+-----------+-------------+--------------+------+--------------+---------------+-------------------------+------------------------+
| 93    | VAL     | A        | 0         | LIG         | A            | 3.64 | 786          | 637           | -8.632, 1.592, -4.031   | -9.644, 0.358, -0.758  | 
+-------+---------+----------+-----------+-------------+--------------+------+--------------+---------------+-------------------------+------------------------+
| 99    | ILE     | A        | 0         | LIG         | A            | 3.69 | 804          | 695           | -4.170, -0.061, -0.268  | -6.028, 1.772, 2.342   | 
+-------+---------+----------+-----------+-------------+--------------+------+--------------+---------------+-------------------------+------------------------+


**Hydrogen Bonds**
+-------+---------+----------+-----------+-------------+--------------+-----------+----------+----------+-----------+-----------+----------+-----------+-------------+--------------+------------------------+------------------------+
| RESNR | RESTYPE | RESCHAIN | RESNR_LIG | RESTYPE_LIG | RESCHAIN_LIG | SIDECHAIN | DIST_H-A | DIST_D-A | DON_ANGLE | PROTISDON | DONORIDX | DONORTYPE | ACCEPTORIDX | ACCEPTORTYPE | LIGCOO                 | PROTCOO                | 
+=======+=========+==========+===========+=============+==============+===========+==========+==========+===========+===========+==========+===========+=============+==============+========================+========================+
| 18    | GLN     | A        | 0         | LIG         | A            | False     | 2.16     | 3.14     | 170.28    | True      | 36       | Nam       | 801         | O.co2        | -5.256, 12.060, -1.918 | -7.592, 12.641, 0.092  | 
+-------+---------+----------+-----------+-------------+--------------+-----------+----------+----------+-----------+-----------+----------+-----------+-------------+--------------+------------------------+------------------------+
| 19    | ILE     | A        | 0         | LIG         | A            | False     | 2.16     | 3.11     | 161.43    | True      | 45       | Nam       | 801         | O.co2        | -5.256, 12.060, -1.918 | -5.150, 12.478, 1.164  | 
+-------+---------+----------+-----------+-------------+--------------+-----------+----------+----------+-----------+-----------+----------+-----------+-------------+--------------+------------------------+------------------------+
| 24    | GLN     | A        | 0         | LIG         | A            | True      | 2.71     | 3.17     | 108.61    | True      | 86       | Nam       | 801         | O.co2        | -5.256, 12.060, -1.918 | -2.181, 12.319, -2.629 | 
+-------+---------+----------+-----------+-------------+--------------+-----------+----------+----------+-----------+-----------+----------+-----------+-------------+--------------+------------------------+------------------------+


**Salt Bridges**
+-------+---------+----------+---------------+-----------+-------------+--------------+------+-----------+-------------+--------------+------------------------+-----------------------+
| RESNR | RESTYPE | RESCHAIN | PROT_IDX_LIST | RESNR_LIG | RESTYPE_LIG | RESCHAIN_LIG | DIST | PROTISPOS | LIG_GROUP   | LIG_IDX_LIST | LIGCOO                 | PROTCOO               | 
+=======+=========+==========+===============+===========+=============+==============+======+===========+=============+==============+========================+=======================+
| 96    | HIS     | A        | 663,666       | 0         | LIG         | A            | 4.83 | True      | Carboxylate | 801,800      | -5.486, 11.116, -1.325 | -7.567, 6.809, -0.672 | 
+-------+---------+----------+---------------+-----------+-------------+--------------+------+-----------+-------------+--------------+------------------------+-----------------------+


**pi-Cation Interactions**
+-------+---------+----------+---------------------+-----------+-------------+--------------+------+--------+-------------+-----------+--------------+-----------------------+-----------------------+
| RESNR | RESTYPE | RESCHAIN | PROT_IDX_LIST       | RESNR_LIG | RESTYPE_LIG | RESCHAIN_LIG | DIST | OFFSET | PROTCHARGED | LIG_GROUP | LIG_IDX_LIST | LIGCOO                | PROTCOO               | 
+=======+=========+==========+=====================+===========+=============+==============+======+========+=============+===========+==============+=======================+=======================+
| 96    | HIS     | A        | 663,664,665,666,667 | 0         | LIG         | A            | 4.39 | 1.64   | False       | tertamine | 792          | -3.714, 5.617, -2.210 | -7.528, 6.694, -0.329 | 
+-------+---------+----------+---------------------+-----------+-------------+--------------+------+--------+-------------+-----------+--------------+-----------------------+-----------------------+



Prediction of noncovalent interactions for PDB structure RP_MDM2_PROTEIN
========================================================================
Created on 2023/03/01 using PLIP v2.2.2

If you are using PLIP in your work, please cite:
Adasme,M. et al. PLIP 2021: expanding the scope of the protein-ligand interaction profiler to DNA and RNA. Nucl. Acids Res. (05 May 2021), gkab294. doi: 10.1093/nar/gkab294
Analysis was done on model 1.

LIG:A:0 (LIG) - SMALLMOLECULE
-----------------------------
Interacting chain(s): A


**Hydrophobic Interactions**
+-------+---------+----------+-----------+-------------+--------------+------+--------------+---------------+------------------------+------------------------+
| RESNR | RESTYPE | RESCHAIN | RESNR_LIG | RESTYPE_LIG | RESCHAIN_LIG | DIST | LIGCARBONIDX | PROTCARBONIDX | LIGCOO                 | PROTCOO                | 
+=======+=========+==========+===========+=============+==============+======+==============+===============+========================+========================+
| 19    | ILE     | A        | 0         | LIG         | A            | 3.84 | 793          | 49            | -3.668, 8.257, -1.376  | -3.844, 9.860, 2.109   | 
+-------+---------+----------+-----------+-------------+--------------+------+--------------+---------------+------------------------+------------------------+
| 54    | LEU     | A        | 0         | LIG         | A            | 3.38 | 798          | 323           | -3.837, 5.010, 0.035   | -1.390, 2.864, -0.888  | 
+-------+---------+----------+-----------+-------------+--------------+------+--------------+---------------+------------------------+------------------------+
| 54    | LEU     | A        | 0         | LIG         | A            | 3.67 | 794          | 322           | -2.933, 6.916, -1.358  | -0.594, 4.082, -1.403  | 
+-------+---------+----------+-----------+-------------+--------------+------+--------------+---------------+------------------------+------------------------+
| 55    | PHE     | A        | 0         | LIG         | A            | 3.55 | 804          | 331           | -2.199, 3.005, -8.508  | 0.928, 2.369, -10.064  | 
+-------+---------+----------+-----------+-------------+--------------+------+--------------+---------------+------------------------+------------------------+
| 59    | GLN     | A        | 0         | LIG         | A            | 3.88 | 808          | 365           | -2.465, -0.648, -9.371 | 0.875, -2.469, -10.132 | 
+-------+---------+----------+-----------+-------------+--------------+------+--------------+---------------+------------------------+------------------------+
| 99    | ILE     | A        | 0         | LIG         | A            | 3.62 | 801          | 695           | -4.718, 3.949, 0.209   | -6.120, 1.475, 2.457   | 
+-------+---------+----------+-----------+-------------+--------------+------+--------------+---------------+------------------------+------------------------+
| 100   | TYR     | A        | 0         | LIG         | A            | 3.19 | 794          | 703           | -2.933, 6.916, -1.358  | -1.177, 7.121, 1.292   | 
+-------+---------+----------+-----------+-------------+--------------+------+--------------+---------------+------------------------+------------------------+


**pi-Stacking**
+-------+---------+----------+-----------+-------------+--------------+---------------------+----------+-------+--------+------+-------------------------+-----------------------+-----------------------+
| RESNR | RESTYPE | RESCHAIN | RESNR_LIG | RESTYPE_LIG | RESCHAIN_LIG | PROT_IDX_LIST       | CENTDIST | ANGLE | OFFSET | TYPE | LIG_IDX_LIST            | LIGCOO                | PROTCOO               | 
+=======+=========+==========+===========+=============+==============+=====================+==========+=======+========+======+=========================+=======================+=======================+
| 96    | HIS     | A        | 0         | LIG         | A            | 663,664,665,666,667 | 3.55     | 14.46 | 0.25   | P    | 783,791,795,798,801,802 | -4.758, 4.701, -0.961 | -7.778, 6.382, -0.149 | 
+-------+---------+----------+-----------+-------------+--------------+---------------------+----------+-------+--------+------+-------------------------+-----------------------+-----------------------+



Prediction of noncovalent interactions for PDB structure NT_MDM2_PROTEIN
=========================================================================
Created on 2023/03/01 using PLIP v2.2.2

If you are using PLIP in your work, please cite:
Adasme,M. et al. PLIP 2021: expanding the scope of the protein-ligand interaction profiler to DNA and RNA. Nucl. Acids Res. (05 May 2021), gkab294. doi: 10.1093/nar/gkab294
Analysis was done on model 1.

LIG:A:0 (LIG) - SMALLMOLECULE
-----------------------------
Interacting chain(s): A


**Hydrophobic Interactions**
+-------+---------+----------+-----------+-------------+--------------+------+--------------+---------------+------------------------+------------------------+
| RESNR | RESTYPE | RESCHAIN | RESNR_LIG | RESTYPE_LIG | RESCHAIN_LIG | DIST | LIGCARBONIDX | PROTCARBONIDX | LIGCOO                 | PROTCOO                | 
+=======+=========+==========+===========+=============+==============+======+==============+===============+========================+========================+
| 54    | LEU     | A        | 0         | LIG         | A            | 3.68 | 818          | 323           | -3.478, 5.253, 0.764   | -1.009, 3.093, -0.907  | 
+-------+---------+----------+-----------+-------------+--------------+------+--------------+---------------+------------------------+------------------------+
| 57    | LEU     | A        | 0         | LIG         | A            | 3.94 | 811          | 352           | -2.699, -0.670, -0.557 | 0.851, -1.560, -2.010  | 
+-------+---------+----------+-----------+-------------+--------------+------+--------------+---------------+------------------------+------------------------+
| 61    | ILE     | A        | 0         | LIG         | A            | 3.51 | 806          | 386           | -7.944, -2.995, -3.892 | -5.473, -5.482, -3.772 | 
+-------+---------+----------+-----------+-------------+--------------+------+--------------+---------------+------------------------+------------------------+
| 61    | ILE     | A        | 0         | LIG         | A            | 3.46 | 811          | 388           | -2.699, -0.670, -0.557 | -3.669, -3.748, -1.791 | 
+-------+---------+----------+-----------+-------------+--------------+------+--------------+---------------+------------------------+------------------------+
| 75    | VAL     | A        | 0         | LIG         | A            | 3.61 | 806          | 504           | -7.944, -2.995, -3.892 | -7.610, -4.022, -0.444 | 
+-------+---------+----------+-----------+-------------+--------------+------+--------------+---------------+------------------------+------------------------+
| 96    | HIS     | A        | 0         | LIG         | A            | 3.68 | 818          | 662           | -3.478, 5.253, 0.764   | -5.856, 7.688, 2.158   | 
+-------+---------+----------+-----------+-------------+--------------+------+--------------+---------------+------------------------+------------------------+
| 99    | ILE     | A        | 0         | LIG         | A            | 3.53 | 819          | 695           | -5.364, 3.780, -0.523  | -5.753, 2.094, 2.554   | 
+-------+---------+----------+-----------+-------------+--------------+------+--------------+---------------+------------------------+------------------------+
| 99    | ILE     | A        | 0         | LIG         | A            | 3.75 | 818          | 693           | -3.478, 5.253, 0.764   | -2.601, 2.204, 2.764   | 
+-------+---------+----------+-----------+-------------+--------------+------+--------------+---------------+------------------------+------------------------+
| 100   | TYR     | A        | 0         | LIG         | A            | 3.64 | 818          | 702           | -3.478, 5.253, 0.764   | -0.773, 6.999, 2.469   | 
+-------+---------+----------+-----------+-------------+--------------+------+--------------+---------------+------------------------+------------------------+


**pi-Stacking**
+-------+---------+----------+-----------+-------------+--------------+---------------------+----------+-------+--------+------+-------------------------+-----------------------+-----------------------+
| RESNR | RESTYPE | RESCHAIN | RESNR_LIG | RESTYPE_LIG | RESCHAIN_LIG | PROT_IDX_LIST       | CENTDIST | ANGLE | OFFSET | TYPE | LIG_IDX_LIST            | LIGCOO                | PROTCOO               | 
+=======+=========+==========+===========+=============+==============+=====================+==========+=======+========+======+=========================+=======================+=======================+
| 96    | HIS     | A        | 0         | LIG         | A            | 663,664,665,666,667 | 3.89     | 13.82 | 1.26   | P    | 814,815,816,817,819,820 | -5.020, 4.266, -1.844 | -7.132, 7.045, -0.127 | 
+-------+---------+----------+-----------+-------------+--------------+---------------------+----------+-------+--------+------+-------------------------+-----------------------+-----------------------+


